Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs113505570 chr16:67853746 T/G 2.04E-5 296 20.92 27.42 17.15 KM Plot
CESC rs113563886 chr16:67947158 T/C 5.98E-6 288 20.7 29.57 17.43 KM Plot
CESC rs113745845 chr19:9736226 G/A 2.54E-14 292 21.97 20.23 3.33 KM Plot
CESC rs113803933 chr3:129241548 G/A 4.32E-5 294 21.97 20.63 14.73 KM Plot
CESC rs113872597 chr12:12482876 CCTG/C 0 289 23.57 17.92 0.47 KM Plot
CESC rs113903791 chr5:96125146 C/T 1.4E-6 299 21.33 24.08 6.73 KM Plot
CESC rs113914709 chr19:9736937 G/A 2.54E-14 291 22.4 20.23 3.33 KM Plot
CESC rs114006288 chr5:96118004 C/T 1.23E-6 297 21.4 24.17 6.73 KM Plot
CESC rs114581360 chr10:29995853 G/T 6.91E-8 289 21.3 20.03 5.23 KM Plot
CESC rs115206024 chr3:129217478 C/T 5.17E-5 294 21.47 20.63 14.73 KM Plot
CESC rs115733606 chr5:96118003 G/A 1.23E-6 297 21.4 24.17 6.73 KM Plot
CESC rs11573614 chr9:110046226 C/T 0 296 21.2 25.77 4 KM Plot
CESC rs11578706 chr1:59090396 A/G 5.47E-5 296 21.23 24.9 13.8 KM Plot
CESC rs11578722 chr1:59090456 A/G 5.47E-5 296 21.23 24.9 13.8 KM Plot
CESC rs11578726 chr1:59090523 A/G 5.47E-5 296 21.23 24.9 13.8 KM Plot